go-ethereum/ethdb/leveldb/leveldb.go
rjl493456442 4d086430bd
core, ethdb, tests, trie: implement NewBatchWithSize API for batcher (#24392)
This PR adds an addtional API called `NewBatchWithSize` for db
batcher. It turns out that leveldb batch memory allocation is
super inefficient. The main reason is the allocation step of
leveldb Batch is too small when the batch size is large. It can
take a few second to build a leveldb batch with 100MB size.

Luckily, leveldb also offers another API called MakeBatch which can
pre-allocate the memory area. So if the approximate size of batch is
known in advance, this API can be used in this case.

It's needed in new state scheme PR which needs to commit a batch of
trie nodes in a single batch. Implement the feature in a seperate PR.
2022-02-15 15:15:13 +02:00

530 lines
18 KiB
Go

// Copyright 2018 The go-ethereum Authors
// This file is part of the go-ethereum library.
//
// The go-ethereum library is free software: you can redistribute it and/or modify
// it under the terms of the GNU Lesser General Public License as published by
// the Free Software Foundation, either version 3 of the License, or
// (at your option) any later version.
//
// The go-ethereum library is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
// GNU Lesser General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public License
// along with the go-ethereum library. If not, see <http://www.gnu.org/licenses/>.
//go:build !js
// +build !js
// Package leveldb implements the key-value database layer based on LevelDB.
package leveldb
import (
"fmt"
"strconv"
"strings"
"sync"
"time"
"github.com/ethereum/go-ethereum/common"
"github.com/ethereum/go-ethereum/ethdb"
"github.com/ethereum/go-ethereum/log"
"github.com/ethereum/go-ethereum/metrics"
"github.com/syndtr/goleveldb/leveldb"
"github.com/syndtr/goleveldb/leveldb/errors"
"github.com/syndtr/goleveldb/leveldb/filter"
"github.com/syndtr/goleveldb/leveldb/opt"
"github.com/syndtr/goleveldb/leveldb/util"
)
const (
// degradationWarnInterval specifies how often warning should be printed if the
// leveldb database cannot keep up with requested writes.
degradationWarnInterval = time.Minute
// minCache is the minimum amount of memory in megabytes to allocate to leveldb
// read and write caching, split half and half.
minCache = 16
// minHandles is the minimum number of files handles to allocate to the open
// database files.
minHandles = 16
// metricsGatheringInterval specifies the interval to retrieve leveldb database
// compaction, io and pause stats to report to the user.
metricsGatheringInterval = 3 * time.Second
)
// Database is a persistent key-value store. Apart from basic data storage
// functionality it also supports batch writes and iterating over the keyspace in
// binary-alphabetical order.
type Database struct {
fn string // filename for reporting
db *leveldb.DB // LevelDB instance
compTimeMeter metrics.Meter // Meter for measuring the total time spent in database compaction
compReadMeter metrics.Meter // Meter for measuring the data read during compaction
compWriteMeter metrics.Meter // Meter for measuring the data written during compaction
writeDelayNMeter metrics.Meter // Meter for measuring the write delay number due to database compaction
writeDelayMeter metrics.Meter // Meter for measuring the write delay duration due to database compaction
diskSizeGauge metrics.Gauge // Gauge for tracking the size of all the levels in the database
diskReadMeter metrics.Meter // Meter for measuring the effective amount of data read
diskWriteMeter metrics.Meter // Meter for measuring the effective amount of data written
memCompGauge metrics.Gauge // Gauge for tracking the number of memory compaction
level0CompGauge metrics.Gauge // Gauge for tracking the number of table compaction in level0
nonlevel0CompGauge metrics.Gauge // Gauge for tracking the number of table compaction in non0 level
seekCompGauge metrics.Gauge // Gauge for tracking the number of table compaction caused by read opt
quitLock sync.Mutex // Mutex protecting the quit channel access
quitChan chan chan error // Quit channel to stop the metrics collection before closing the database
log log.Logger // Contextual logger tracking the database path
}
// New returns a wrapped LevelDB object. The namespace is the prefix that the
// metrics reporting should use for surfacing internal stats.
func New(file string, cache int, handles int, namespace string, readonly bool) (*Database, error) {
return NewCustom(file, namespace, func(options *opt.Options) {
// Ensure we have some minimal caching and file guarantees
if cache < minCache {
cache = minCache
}
if handles < minHandles {
handles = minHandles
}
// Set default options
options.OpenFilesCacheCapacity = handles
options.BlockCacheCapacity = cache / 2 * opt.MiB
options.WriteBuffer = cache / 4 * opt.MiB // Two of these are used internally
if readonly {
options.ReadOnly = true
}
})
}
// NewCustom returns a wrapped LevelDB object. The namespace is the prefix that the
// metrics reporting should use for surfacing internal stats.
// The customize function allows the caller to modify the leveldb options.
func NewCustom(file string, namespace string, customize func(options *opt.Options)) (*Database, error) {
options := configureOptions(customize)
logger := log.New("database", file)
usedCache := options.GetBlockCacheCapacity() + options.GetWriteBuffer()*2
logCtx := []interface{}{"cache", common.StorageSize(usedCache), "handles", options.GetOpenFilesCacheCapacity()}
if options.ReadOnly {
logCtx = append(logCtx, "readonly", "true")
}
logger.Info("Allocated cache and file handles", logCtx...)
// Open the db and recover any potential corruptions
db, err := leveldb.OpenFile(file, options)
if _, corrupted := err.(*errors.ErrCorrupted); corrupted {
db, err = leveldb.RecoverFile(file, nil)
}
if err != nil {
return nil, err
}
// Assemble the wrapper with all the registered metrics
ldb := &Database{
fn: file,
db: db,
log: logger,
quitChan: make(chan chan error),
}
ldb.compTimeMeter = metrics.NewRegisteredMeter(namespace+"compact/time", nil)
ldb.compReadMeter = metrics.NewRegisteredMeter(namespace+"compact/input", nil)
ldb.compWriteMeter = metrics.NewRegisteredMeter(namespace+"compact/output", nil)
ldb.diskSizeGauge = metrics.NewRegisteredGauge(namespace+"disk/size", nil)
ldb.diskReadMeter = metrics.NewRegisteredMeter(namespace+"disk/read", nil)
ldb.diskWriteMeter = metrics.NewRegisteredMeter(namespace+"disk/write", nil)
ldb.writeDelayMeter = metrics.NewRegisteredMeter(namespace+"compact/writedelay/duration", nil)
ldb.writeDelayNMeter = metrics.NewRegisteredMeter(namespace+"compact/writedelay/counter", nil)
ldb.memCompGauge = metrics.NewRegisteredGauge(namespace+"compact/memory", nil)
ldb.level0CompGauge = metrics.NewRegisteredGauge(namespace+"compact/level0", nil)
ldb.nonlevel0CompGauge = metrics.NewRegisteredGauge(namespace+"compact/nonlevel0", nil)
ldb.seekCompGauge = metrics.NewRegisteredGauge(namespace+"compact/seek", nil)
// Start up the metrics gathering and return
go ldb.meter(metricsGatheringInterval)
return ldb, nil
}
// configureOptions sets some default options, then runs the provided setter.
func configureOptions(customizeFn func(*opt.Options)) *opt.Options {
// Set default options
options := &opt.Options{
Filter: filter.NewBloomFilter(10),
DisableSeeksCompaction: true,
}
// Allow caller to make custom modifications to the options
if customizeFn != nil {
customizeFn(options)
}
return options
}
// Close stops the metrics collection, flushes any pending data to disk and closes
// all io accesses to the underlying key-value store.
func (db *Database) Close() error {
db.quitLock.Lock()
defer db.quitLock.Unlock()
if db.quitChan != nil {
errc := make(chan error)
db.quitChan <- errc
if err := <-errc; err != nil {
db.log.Error("Metrics collection failed", "err", err)
}
db.quitChan = nil
}
return db.db.Close()
}
// Has retrieves if a key is present in the key-value store.
func (db *Database) Has(key []byte) (bool, error) {
return db.db.Has(key, nil)
}
// Get retrieves the given key if it's present in the key-value store.
func (db *Database) Get(key []byte) ([]byte, error) {
dat, err := db.db.Get(key, nil)
if err != nil {
return nil, err
}
return dat, nil
}
// Put inserts the given value into the key-value store.
func (db *Database) Put(key []byte, value []byte) error {
return db.db.Put(key, value, nil)
}
// Delete removes the key from the key-value store.
func (db *Database) Delete(key []byte) error {
return db.db.Delete(key, nil)
}
// NewBatch creates a write-only key-value store that buffers changes to its host
// database until a final write is called.
func (db *Database) NewBatch() ethdb.Batch {
return &batch{
db: db.db,
b: new(leveldb.Batch),
}
}
// NewBatchWithSize creates a write-only database batch with pre-allocated buffer.
func (db *Database) NewBatchWithSize(size int) ethdb.Batch {
return &batch{
db: db.db,
b: leveldb.MakeBatch(size),
}
}
// NewIterator creates a binary-alphabetical iterator over a subset
// of database content with a particular key prefix, starting at a particular
// initial key (or after, if it does not exist).
func (db *Database) NewIterator(prefix []byte, start []byte) ethdb.Iterator {
return db.db.NewIterator(bytesPrefixRange(prefix, start), nil)
}
// Stat returns a particular internal stat of the database.
func (db *Database) Stat(property string) (string, error) {
return db.db.GetProperty(property)
}
// Compact flattens the underlying data store for the given key range. In essence,
// deleted and overwritten versions are discarded, and the data is rearranged to
// reduce the cost of operations needed to access them.
//
// A nil start is treated as a key before all keys in the data store; a nil limit
// is treated as a key after all keys in the data store. If both is nil then it
// will compact entire data store.
func (db *Database) Compact(start []byte, limit []byte) error {
return db.db.CompactRange(util.Range{Start: start, Limit: limit})
}
// Path returns the path to the database directory.
func (db *Database) Path() string {
return db.fn
}
// meter periodically retrieves internal leveldb counters and reports them to
// the metrics subsystem.
//
// This is how a LevelDB stats table looks like (currently):
// Compactions
// Level | Tables | Size(MB) | Time(sec) | Read(MB) | Write(MB)
// -------+------------+---------------+---------------+---------------+---------------
// 0 | 0 | 0.00000 | 1.27969 | 0.00000 | 12.31098
// 1 | 85 | 109.27913 | 28.09293 | 213.92493 | 214.26294
// 2 | 523 | 1000.37159 | 7.26059 | 66.86342 | 66.77884
// 3 | 570 | 1113.18458 | 0.00000 | 0.00000 | 0.00000
//
// This is how the write delay look like (currently):
// DelayN:5 Delay:406.604657ms Paused: false
//
// This is how the iostats look like (currently):
// Read(MB):3895.04860 Write(MB):3654.64712
func (db *Database) meter(refresh time.Duration) {
// Create the counters to store current and previous compaction values
compactions := make([][]float64, 2)
for i := 0; i < 2; i++ {
compactions[i] = make([]float64, 4)
}
// Create storage for iostats.
var iostats [2]float64
// Create storage and warning log tracer for write delay.
var (
delaystats [2]int64
lastWritePaused time.Time
)
var (
errc chan error
merr error
)
timer := time.NewTimer(refresh)
defer timer.Stop()
// Iterate ad infinitum and collect the stats
for i := 1; errc == nil && merr == nil; i++ {
// Retrieve the database stats
stats, err := db.db.GetProperty("leveldb.stats")
if err != nil {
db.log.Error("Failed to read database stats", "err", err)
merr = err
continue
}
// Find the compaction table, skip the header
lines := strings.Split(stats, "\n")
for len(lines) > 0 && strings.TrimSpace(lines[0]) != "Compactions" {
lines = lines[1:]
}
if len(lines) <= 3 {
db.log.Error("Compaction leveldbTable not found")
merr = errors.New("compaction leveldbTable not found")
continue
}
lines = lines[3:]
// Iterate over all the leveldbTable rows, and accumulate the entries
for j := 0; j < len(compactions[i%2]); j++ {
compactions[i%2][j] = 0
}
for _, line := range lines {
parts := strings.Split(line, "|")
if len(parts) != 6 {
break
}
for idx, counter := range parts[2:] {
value, err := strconv.ParseFloat(strings.TrimSpace(counter), 64)
if err != nil {
db.log.Error("Compaction entry parsing failed", "err", err)
merr = err
continue
}
compactions[i%2][idx] += value
}
}
// Update all the requested meters
if db.diskSizeGauge != nil {
db.diskSizeGauge.Update(int64(compactions[i%2][0] * 1024 * 1024))
}
if db.compTimeMeter != nil {
db.compTimeMeter.Mark(int64((compactions[i%2][1] - compactions[(i-1)%2][1]) * 1000 * 1000 * 1000))
}
if db.compReadMeter != nil {
db.compReadMeter.Mark(int64((compactions[i%2][2] - compactions[(i-1)%2][2]) * 1024 * 1024))
}
if db.compWriteMeter != nil {
db.compWriteMeter.Mark(int64((compactions[i%2][3] - compactions[(i-1)%2][3]) * 1024 * 1024))
}
// Retrieve the write delay statistic
writedelay, err := db.db.GetProperty("leveldb.writedelay")
if err != nil {
db.log.Error("Failed to read database write delay statistic", "err", err)
merr = err
continue
}
var (
delayN int64
delayDuration string
duration time.Duration
paused bool
)
if n, err := fmt.Sscanf(writedelay, "DelayN:%d Delay:%s Paused:%t", &delayN, &delayDuration, &paused); n != 3 || err != nil {
db.log.Error("Write delay statistic not found")
merr = err
continue
}
duration, err = time.ParseDuration(delayDuration)
if err != nil {
db.log.Error("Failed to parse delay duration", "err", err)
merr = err
continue
}
if db.writeDelayNMeter != nil {
db.writeDelayNMeter.Mark(delayN - delaystats[0])
}
if db.writeDelayMeter != nil {
db.writeDelayMeter.Mark(duration.Nanoseconds() - delaystats[1])
}
// If a warning that db is performing compaction has been displayed, any subsequent
// warnings will be withheld for one minute not to overwhelm the user.
if paused && delayN-delaystats[0] == 0 && duration.Nanoseconds()-delaystats[1] == 0 &&
time.Now().After(lastWritePaused.Add(degradationWarnInterval)) {
db.log.Warn("Database compacting, degraded performance")
lastWritePaused = time.Now()
}
delaystats[0], delaystats[1] = delayN, duration.Nanoseconds()
// Retrieve the database iostats.
ioStats, err := db.db.GetProperty("leveldb.iostats")
if err != nil {
db.log.Error("Failed to read database iostats", "err", err)
merr = err
continue
}
var nRead, nWrite float64
parts := strings.Split(ioStats, " ")
if len(parts) < 2 {
db.log.Error("Bad syntax of ioStats", "ioStats", ioStats)
merr = fmt.Errorf("bad syntax of ioStats %s", ioStats)
continue
}
if n, err := fmt.Sscanf(parts[0], "Read(MB):%f", &nRead); n != 1 || err != nil {
db.log.Error("Bad syntax of read entry", "entry", parts[0])
merr = err
continue
}
if n, err := fmt.Sscanf(parts[1], "Write(MB):%f", &nWrite); n != 1 || err != nil {
db.log.Error("Bad syntax of write entry", "entry", parts[1])
merr = err
continue
}
if db.diskReadMeter != nil {
db.diskReadMeter.Mark(int64((nRead - iostats[0]) * 1024 * 1024))
}
if db.diskWriteMeter != nil {
db.diskWriteMeter.Mark(int64((nWrite - iostats[1]) * 1024 * 1024))
}
iostats[0], iostats[1] = nRead, nWrite
compCount, err := db.db.GetProperty("leveldb.compcount")
if err != nil {
db.log.Error("Failed to read database iostats", "err", err)
merr = err
continue
}
var (
memComp uint32
level0Comp uint32
nonLevel0Comp uint32
seekComp uint32
)
if n, err := fmt.Sscanf(compCount, "MemComp:%d Level0Comp:%d NonLevel0Comp:%d SeekComp:%d", &memComp, &level0Comp, &nonLevel0Comp, &seekComp); n != 4 || err != nil {
db.log.Error("Compaction count statistic not found")
merr = err
continue
}
db.memCompGauge.Update(int64(memComp))
db.level0CompGauge.Update(int64(level0Comp))
db.nonlevel0CompGauge.Update(int64(nonLevel0Comp))
db.seekCompGauge.Update(int64(seekComp))
// Sleep a bit, then repeat the stats collection
select {
case errc = <-db.quitChan:
// Quit requesting, stop hammering the database
case <-timer.C:
timer.Reset(refresh)
// Timeout, gather a new set of stats
}
}
if errc == nil {
errc = <-db.quitChan
}
errc <- merr
}
// batch is a write-only leveldb batch that commits changes to its host database
// when Write is called. A batch cannot be used concurrently.
type batch struct {
db *leveldb.DB
b *leveldb.Batch
size int
}
// Put inserts the given value into the batch for later committing.
func (b *batch) Put(key, value []byte) error {
b.b.Put(key, value)
b.size += len(key) + len(value)
return nil
}
// Delete inserts the a key removal into the batch for later committing.
func (b *batch) Delete(key []byte) error {
b.b.Delete(key)
b.size += len(key)
return nil
}
// ValueSize retrieves the amount of data queued up for writing.
func (b *batch) ValueSize() int {
return b.size
}
// Write flushes any accumulated data to disk.
func (b *batch) Write() error {
return b.db.Write(b.b, nil)
}
// Reset resets the batch for reuse.
func (b *batch) Reset() {
b.b.Reset()
b.size = 0
}
// Replay replays the batch contents.
func (b *batch) Replay(w ethdb.KeyValueWriter) error {
return b.b.Replay(&replayer{writer: w})
}
// replayer is a small wrapper to implement the correct replay methods.
type replayer struct {
writer ethdb.KeyValueWriter
failure error
}
// Put inserts the given value into the key-value data store.
func (r *replayer) Put(key, value []byte) {
// If the replay already failed, stop executing ops
if r.failure != nil {
return
}
r.failure = r.writer.Put(key, value)
}
// Delete removes the key from the key-value data store.
func (r *replayer) Delete(key []byte) {
// If the replay already failed, stop executing ops
if r.failure != nil {
return
}
r.failure = r.writer.Delete(key)
}
// bytesPrefixRange returns key range that satisfy
// - the given prefix, and
// - the given seek position
func bytesPrefixRange(prefix, start []byte) *util.Range {
r := util.BytesPrefix(prefix)
r.Start = append(r.Start, start...)
return r
}